PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485677.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 467aa    MW: 51798.4 Da    PI: 4.9685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-053573941254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_004485677.1 357 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 394
                     677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.55E-6330398No hitNo description
PROSITE profilePS5088811.973345394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-12355413IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-9359403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MAEEYQAGIC GETWWNINNS TRGVFPLMMN SSSTCSIAAN DGGNYSTWQN EFFGLKETTT  60
TTKSCSIEET NTNFDVSDGS FCFLDTHKPQ QSESANLIDS TLQIMDFGLS SPTSSNWNHS  120
LFGTGRPENN FHSVLEEETM IESSNNSQIQ KEWNTKNMIS STSGIRQVST LDAFKPMDQE  180
FSLDEQSGLS CGFPIETSNS YDYPSTLIQS LFDPQTQPQP QTHNSLFTNP CISYSSSANY  240
GTSSNEVSSP TWSKISSLMK PSMPKQQLSG LQFSNNTPFW NASAEALNDI RAGVLASSQA  300
QYQSPNFEDK RLNCPITLLN KLKREESPER TKKNSSEGAV KRARIETPSP LPTFKVRKEK  360
LGDRITALQQ LVSPFGKTDT ASVLHEAIEY IKFLHDQVNV LSAPYMKNGS PIQHHQGCDN  420
VKESEGKKQD LRSQGLCLVP IASTFPVTNE TIVDFWTPSF GGPLFGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485677.10.0PREDICTED: transcription factor bHLH112-like isoform X2
TrEMBLV7BQN40.0V7BQN4_PHAVU; Uncharacterized protein
STRINGGLYMA15G07010.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.36e-56bHLH family protein